Computational Neuroscience
Computational Networking Pre-requisitesComputational Networking Pre-requisitesRecommended Background**: Familiarity with basic concepts in linear algebra, calculus, and probability theory. Specifically, ability to understand simple equations involving vectors and matrices, differentiate simple functions, and understand what a probability distribution is. For video lectures reviewing these topics, please visit the Linear Algebra, Calculus, and Probability sections of Khanacademy.org. For homeworks, some familiarity with Matlab/Octave or Python would be useful. No prior bac
Syllabus
Topics that we will cover in this course:
- Basic Neurobiology
- Neural Encoding
- Neural Decoding
- Information Theory
- Modeling Single Neurons
- Synapse and Network Models: Feedforward and Recurrent Networks
- Synaptic Plasticity and Learning
Schedule
- Week 1: Course Introduction and Basic Neurobiology (Rajesh Rao)
- Week 2: What do Neurons Encode? Neural Encoding Models (Adrienne Fairhall)
- Week 3: Extracting Information from Neurons: Neural Decoding (Adrienne Fairhall)
- Week 4: Information and Coding Principles (Adrienne Fairhall)
- Week 5: Simulating the Brain from the Ground Up: Models of Single Neurons (Adrienne Fairhall)
- Week 6: Modeling Synapses and Networks of Neurons (Rajesh Rao)
- Week 7: How do Brains Learn? Modeling Synaptic Plasticity and Learning (Rajesh Rao)
- Week 8: Learning to Act: Reinforcement Learning (Rajesh Rao)
Recommended Reading
- Week 1: Dayan and Abbott, Theoretical Neuroscience, Chapter 1 and Mathematical Appendix
- Week 2: Dayan and Abbott, Theoretical Neuroscience, Chapter 2; Spikes, Rieke et al, appendices
- Week 3: Dayan and Abbott, Theoretical Neuroscience, Chapter 3
- Week 4: Dayan and Abbott, Theoretical Neuroscience, Chapter 4
- Week 5: Dayan and Abbott, Theoretical Neuroscience, Chapters 5 & 6
- Week 6: Dayan and Abbott, Theoretical Neuroscience, Chapter 7
- Week 7: Dayan and Abbott, Theoretical Neuroscience, Chapters 8 & 10
- Week 8: Dayan and Abbott, Theoretical Neuroscience, Chapter 9